EPISEQ® SARS-COV-2

for SARS-CoV-2 variant identification starting from NGS data

01       |       02       |       03

UPLOAD

ANALYZE

REPORT

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FAST AND INTUITIVE WORKFLOW

01         UPLOAD

From your personal account you can directly upload your:

  • Illumina® (paired-end or single-end),

  • Thermo Fisher Ion Torrent® or

  • Oxford Nanopore Technologies® FASTQ files.

Use of targeted amplicon-based or targeted capture-based approaches are recommended.

For targeted amplicon-based approaches, mandatory use of ARTIC V3 primers.

02         ANALYZE

Using a straightforward credit system, you will get access to the cloud service that performs all steps necessary, starting from input validation, followed by quality assessment of the raw sequencing data, a genome assembly, variant identification and mutation screening.

03         REPORT

A sample pdf report is available once the analysis is complete.

The report can be consulted in the EPISEQ® SARS-COV-2 application or downloaded if desired.